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Protein Sequencing Protocols, 2nd ed.

ISBN-10:0-89603-975-7
ISBN-13:978-0-89603-975-9

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Description

General descriptionThis book is an update to the much-acclaimed first edition with new and updated techniques for determining the sequence of proteins and peptides. This edition includes not only novel approaches to the validation of quality assurance methods, reflecting the current importance of biopharmaceuticals, but also offers a guide to analysis of protein sequence information via the powerful new tools of bioinformatics. This comprehensive book provides investigators a ready source of easy-to-follow protocols that simplify choosing the most appropriate method for protein sequence determination.

Properties

publication infoB.J. Smith, Humana Press, 2002, 508 pp., hard cover

Table Of Contents

Table of ContentsStrategies for Handling Polypeptides on a Micro-Scale
SDS Polyacrylamide Gel Electrophoresis for N-Terminal Protein Sequencing
Two-Dimensional Polyacrylamide Gel Electrophoresis for the Separation of Proteins for Chemical Characterization
Electroblotting of Proteins from Polyacrylamide Gels for Chemical Characterization
Enzymatic Cleavage of Proteins
Chemical Cleavage of Polypeptides
Enzymatic Preparation and Isolation of Glycopeptides
Analytical and Micropreparative Capillary Electrophoresis of Peptides
High-Performance Liquid Chromatography On-Line Derivative Spectroscopy for the Characterization of Peptides with Aromatic Amino Acid Residues
Hydrolysis of Samples for Amino Acid Analysis
Amino Acid Analysis: Precolumn Derivatization Methods
Post Column Amino Acid Analysis
Amino Acid Analysis Using Pre-Column Derivatization with 6-Aminoquinolyl-N-Hydroxysuccinimidyl Carbamate: Analysis of Hydrolyzed Proteins and Electroblotted Samples
Amino Acid Analysis in Protein Hydrolysates Using Anion Exchange Chromatography and IPAD Detection
d-Amino Acid Analysis
Validation of Amino Acid Analysis Methods
Electrospray Mass Spectrometry of Peptides, Proteins, and Glycoproteins
Peptide Mass Fingerprinting Using MALDI-TOF Mass Spectrometry
Nanoelectrospray Tandem Mass Spectrometry and Sequence Similarity Searching for Identification of Proteins from Organisms with Unknown Genomes
Direct Identification of Proteins in Ultracomplex Mixtures: Applications to Proteome Analysis
Identification of PTH-Amino Acids by HPLC
Protein Sequencer Maintenance and Troubleshooting
N-Terminal Protein Sequencing for Special Applications
Identification of Phosphorylation Sites by Edman Degradation
Validation of Protein Sequencing in a Regulated Laboratory
Automated C-Terminal Protein Sequence Analysis Using the Alkylated-Thiohydantoin Method
Chemical Modifications of Proteins as an Aid to Sequence Analysis
Deblocking of N-Terminally Modified Proteins
Deblocking of Proteins Containing N-Terminal Pyroglutamic Acid
Identification of Sites of Protein Glycosylation
Analysis of Sites of Protein Phosphorylation
Quantitation and Location of Disulfide Bonds in Proteins
Getting the Most from Your Protein Sequence
Appendix 1: Letter Codes, Structures, Masses, and Derivatives of Amino Acids
Appendix 2: Protein Consensus Sequence Motifs
Index